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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015848842.1_cds_XP_016510559.1_23383
CDS Infomation

[gene=LOC107827856] [db_xref=GeneID:107827856] [protein=probable prolyl 4-hydroxylase 10] [protein_id=XP_016510559.1] [location=join(25178..25374,25478..25568,26079..26176,26308..26405,27812..27941,28023..28210,28492..28565)] [gbkey=CDS]
Sequence

ATGGCAGTGAAAGGGAGGCATTCCCGAGTTGGGCCTAGGAAATCGTCGAATTCCACTCTA
ATTTTTGGTGGGTTTATTATGTTATCATTTGTGGTCCTCATTCTTCTCGCTTTCGGCATT
TTCTCCATTCCCAGCAGTTCAAGAGGCTCTCAGAAAGCACACGATCTTAGCTCTATAGCA
CACAATACAGTTCAAAGAGGTGATGATGAAGATGATGATGGAAAAGGAGATCAGTGGGTT
GAAGTGATTTCTTTGGAACCAAGAGCCTACATTTACCATAACTTTTTGTCCAAAGAGGAA
TGCGAGTATCTGATTAGTCTTGCCAAGCCTCACATGCAAAAGTCAACTGTTGTAGACAGT
GCTACTGGCAAGAGTAAGGACAGCAGGGTCCGAACCAGTTCAGGAACCTTTCTTGCAAGA
GGACGTGATAAAGTGATCAGGAATATTGAGAAAAGGATTGCAGATTTCACCTTCATACCA
GTAGAGCATGGGGAAGGTCTTCAAGTTCTCCACTACGAAGTGGGGCAAAAGTATGAACCC
CACTATGATTATTTTCTTGATGAGTTTAACACTAAAAATGGAGGTCAACGCATTGCTACA
GTTTTAATGTACTTGTCAGATGTTGAAGAAGGGGGTGAAACAGTATTTCCAGCTGCGAAG
GGAAATTATAGTGTGGTCCCTTGGTGGAATGAACTATCTGAATGTGGAAAGGGTGGACTT
TCAGTAAAACCAAAGAGGGGTGATGCATTGCTTTTCTGGAGCATGAAGCCTGATGCGACT
CTAGATCCGTCAAGTTTGCATGGTGGGTGCCCTGTGATTAAAGGCAACAAATGGTCGTCA
ACAAAATGGATACGCGTCCATGAATACAAAGCTTAA

Peptide Sequence

PEP ID

XP_016510559.1
PEP Infomation

PREDICTED: probable prolyl 4-hydroxylase 10 [Nicotiana tabacum]
Sequence

MAVKGRHSRVGPRKSSNSTLIFGGFIMLSFVVLILLAFGIFSIPSSSRGSQKAHDLSSIA
HNTVQRGDDEDDDGKGDQWVEVISLEPRAYIYHNFLSKEECEYLISLAKPHMQKSTVVDS
ATGKSKDSRVRTSSGTFLARGRDKVIRNIEKRIADFTFIPVEHGEGLQVLHYEVGQKYEP
HYDYFLDEFNTKNGGQRIATVLMYLSDVEEGGETVFPAAKGNYSVVPWWNELSECGKGGL
SVKPKRGDALLFWSMKPDATLDPSSLHGGCPVIKGNKWSSTKWIRVHEYKA

Transcript Sequence

Gene sequence data has not been registered.